BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D08SP1|AL427007
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1506 1766 0.0
>3x_Contig1506
Length = 7652
Score = 1766 bits (888), Expect = 0.0
Identities = 892/896 (99%)
Strand = Plus / Plus
Query: 1 gatcacgtgagtccgaattggaggagtccatactatttctatagtgtcgtatatctcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5964 gatcacgtgagtccgaattggaggagtccatactatttctatagtgtcgtatatctcctt 6023
Query: 61 gttgcccttgtccttgttcttcttcctgttgctgttgagattcattgccgtgtcctgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6024 gttgcccttgtccttgttcttcttcctgttgctgttgagattcattgccgtgtcctgcat 6083
Query: 121 gaccaattgagttgtcttgaacattcgtctctctgaaatgtgatggattatcggtattgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6084 gaccaattgagttgtcttgaacattcgtctctctgaaatgtgatggattatcggtattgc 6143
Query: 181 ccgtttcgttagcctctgtttcgatgtcttcttcagcttcttgatctactccatgattcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6144 ccgtttcgttagcctctgtttcgatgtcttcttcagcttcttgatctactccatgattcg 6203
Query: 241 cattttcatcttcatcttcctcagcagtttcatcgatttgaaccaatttcggtctagctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6204 cattttcatcttcatcttcctcagcagtttcatcgatttgaaccaatttcggtctagctc 6263
Query: 301 ggattgcagtagtcatattattcgtggcacccgcaccattattattattccctgcaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6264 ggattgcagtagtcatattattcgtggcacccgcaccattattattattccctgcaaatg 6323
Query: 361 aaccgctttcttcctcgttcaaatcttgtaagttctgttggagctcgtcgtcgtcatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6324 aaccgctttcttcctcgttcaaatcttgtaagttctgttggagctcgtcgtcgtcatctt 6383
Query: 421 catcaccgccaagaatactggaccccaatgtaatatgtgactttcgatctgaatcctggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6384 catcaccgccaagaatactggaccccaatgtaatatgtgactttcgatctgaatcctggt 6443
Query: 481 aaaatcttcttgaacctcttccttggcctttcctcaaattcttcttcgttagattcgtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6444 aaaatcttcttgaacctcttccttggcctttcctcaaattcttcttcgttagattcgtgg 6503
Query: 541 tgacacctgggatatatgctacagggatgatatttsatgcggtactggtctgaacggtgg 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6504 tgacacctgggatatatgctacagggatgatatttgatgcggtactggtctgaacggtgg 6563
Query: 601 cagcgctacttctatttctcttgttcctttctctgacgcgtgatgacgaagagccaacac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6564 cagcgctacttctatttctcttgttcctttctctgacgcgtgatgacgaagagccaacac 6623
Query: 661 gaagcatgcctggatgaagcggtgatgatccgtttggmtcaagactcgtacctttttcca 720
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6624 gaagcatgcctggatgaagcggtgatgatccgtttggatcaagactcgtacctttttcca 6683
Query: 721 tatattcgggatcctggggcaatgcagaccgttttcttttataatatctgtwatacaaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6684 tatattcgggatcctggggcaatgcagaccgttttcttttataatatctgtaatacaaga 6743
Query: 781 agcccaacaccacgactatgactacgaatgcgacaccaccgacgacaccaccaacaatag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6744 agcccaacaccacgactatgactacgaatgcgacaccaccgacgacaccaccaacaatag 6803
Query: 841 gtccgaccttattgctggaagaggacgacgaagaagacgctccgctagaaatarca 896
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 6804 gtccgaccttattgctggaagaggacgacgaagaagacgctccgctagaaatagca 6859
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7806
Number of Sequences: 1807
Number of extensions: 7806
Number of successful extensions: 104
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)